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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925885.1_cds_XP_016474060.1_66125
CDS Infomation

[gene=LOC107795867] [db_xref=GeneID:107795867] [protein=pectin acetylesterase 12-like] [protein_id=XP_016474060.1] [location=join(66454..66667,67387..67469,68130..68259,68349..68422,69382..69468,69544..69668,69777..69837,70189..70242,70340..70417,70543..70648,70738..70883,70990..71097)] [gbkey=CDS]
Sequence

ATGGCGAAGCTTTTCATGTGGTTATGGAGTTTGGTTTTTGTTGGATTTTTTGTGGTTAGC
AAATTAGTAGATTCTTATGAATTTGAAGAATTCTTTTTCAATAAAACCGAAGGGGTATTC
TTGGAGTCTGTATATGGAGCTTCAGCAGCTGGTGGTCCAACTCCTCTTATGGTTGGTCTT
ACACTCATTCATGGTGCTGGCGCCCGAGGAGCTGTGTGTTTGGATGGAACACTGCCAGGT
TACCACATCCATCGAGGTTATGGTCCTGGGGCAAACAGTTGGCTCGTTCAATTGGAGGGT
GGAGGATGGTGTAACACTATTAGAAGTTGTGTTTATCGCAAAAAGACAAGGCGGGGATCA
TCTAATTACATGGAAAAACAGATCCCGTTTACTGGGATTTTGAGTAACAAGGCCGAAGAA
AATCCAGATTTTTATAACTGGAATAGAGTAAAAGTTCGCTACTGTGATGGCGCCTCCTTT
ACAGGAGATAGCGAAAATAAGGCTGCACAATTGCAATTTAGAGGCAAGCGCATATATGAG
GCTGCAATGAACGAGTTAATGTCGAAAGGGATGCGATATGCCAAGCAGGCTCTTCTCTCT
GGATGTTCTGCTGGTGGTCTAGCTTCAATCATGCATTGTGATGACTTCCGCAATTTGCTC
CCATATAGTACTAAAGTGAAGTGCCTGAGTGATGCTGGATTATTTATGGACGCAGTTGAT
GTATCTGGAGGGCGCTCCCTGAGAAATTTCTTTGGAGGTGTGGTTCAGCTACAGGGTCTT
CATAAGACGCTACCAAGAACGTGCACCAACCACCTTGATGCAACCTCATGCTTCTTTCCT
GAGAATTTAATCAACAACATCAAGACCCCTCTTTTCCTGCTGAATGCTGCCTATGATTCC
TGGCAGCTTCAGGAAAGTTTGGCTCCTCGTGGAGCTGATCCTCATGGCGTATGGCACGAT
TGTACACTCAATAATGAAAGATGTTCTCCTTCTCAGATTCAATTTCTGCAAGGTTTTAGG
ATTCATATGCTTAATACAATTAAAAGATTTGCCGCTTCAAGACAAAATGGTTTGTTTATA
AACTCATGCTTCGCCCACTGCCAATCGGAGAGGCAAGATACATGGTTTTCCGATAATTCT
CCCATGATTAATAACAAGCCGATTGCACTTGCAGTTGGAGATTGGTACTTTGATCGATCA
GGTATGAAGGCAATAGACTGTGCATATCCATGCGACAGAACATGTCACAACCTGGTCTTT
AGATGA

Peptide Sequence

PEP ID

XP_016474060.1
PEP Infomation

PREDICTED: pectin acetylesterase 12-like [Nicotiana tabacum]
Sequence

MAKLFMWLWSLVFVGFFVVSKLVDSYEFEEFFFNKTEGVFLESVYGASAAGGPTPLMVGL
TLIHGAGARGAVCLDGTLPGYHIHRGYGPGANSWLVQLEGGGWCNTIRSCVYRKKTRRGS
SNYMEKQIPFTGILSNKAEENPDFYNWNRVKVRYCDGASFTGDSENKAAQLQFRGKRIYE
AAMNELMSKGMRYAKQALLSGCSAGGLASIMHCDDFRNLLPYSTKVKCLSDAGLFMDAVD
VSGGRSLRNFFGGVVQLQGLHKTLPRTCTNHLDATSCFFPENLINNIKTPLFLLNAAYDS
WQLQESLAPRGADPHGVWHDCTLNNERCSPSQIQFLQGFRIHMLNTIKRFAASRQNGLFI
NSCFAHCQSERQDTWFSDNSPMINNKPIALAVGDWYFDRSGMKAIDCAYPCDRTCHNLVF
R

Transcript Sequence

Gene sequence data has not been registered.